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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015793368.1_cds_XP_016433576.1_2887
CDS Infomation

[gene=LOC107760065] [db_xref=GeneID:107760065] [protein=polygalacturonase-like] [protein_id=XP_016433576.1] [location=join(117074..117511,118251..118540,119638..119866,120441..120659)] [gbkey=CDS]
Sequence

ATGGATAACCTGATAATATCTTGCATTACTGTCCTCTTATCTTCTATATTTCTATTCTTG
CAATCAAATGCAACATCAACCTACAATGTGTTAAGCTTTGGTGCCAAACCAAATGGCCAA
ACTGATGCAACTCAGACATTTCTGAAGGCATGGAGCGCTGCATGCAGCTCAGTGCAACCA
GCGACCATTTACGTTCCCCGAGGACGTTATCTACTAAAGGCAGCAACATTTAGAGGGCCA
TGTCAAAATAGAATAACTGTAAGGATTGATGGAACCCTTGTGGCTCCATTGGATTATTGG
GCCATTGGCAACTCCGGCTACTGGCTTTTGTTCATTCAGGTCAATGGGATTTCGGTCATC
GGTGGAAATCTTGATGCTAAAGGAGCAGCTTTTTGGGCTTGCCGGAAATCGGGCAATAAT
TGCCCAGTTGGAGCTAGGTCGATAACCTTCAATTGGGCTAATGATGTTGTGATAAGTGGC
TTACTATCAATCAACAGCCAGCTAACACATATTGTGATCAATAGCTGCAACAACGTGATG
GTTCGAAAGGTAAGAACAATAGCCCCCGATCAGAGCCCAAACACCGATGGCATTCATGTT
CAATCATCAACTGGGGTTACTATCATAGATAGTAGATTCAAAACTGGAGATGACTGTATA
TCTATTGGACCTGGCACTAGAAATCTTTGGATGGAGAACATTCTATGCGGACCTGGACAT
GGTGTTAGCATTGGAAGTCTAGCAAGGAATTATGAAGAAGATGGCGTGCAGAATGTGACA
TTGGTTTACTCGATATTCACAGGATCTGATAATGGGTTAAGAATAAAATCTTGGGCAAGA
TCCAGCACTGGTTTCGTCACCAACATTAATTACCGCAACATAGTCATGAAGTACGTTGAC
AATCCAATCATCATTGATCAGAATTACTGCCCCAACAAACAAGATTGTCCAGGCGAGACT
TCTGGTGTAAAGATTAGTCAAGTAACGTATGAAAATATACAAGGGACGTCAACAACTCCA
GTAGCTATGAAATTTGACTGCAGTCCCAGCAATCCATGCAAAGGAATCCAGATAAAAGAC
ATAAAGCTCACTCATATGAACAAAAAGGCACAATCTTTTTGCAAAAATGTTCAGGGAAGT
AAAAAAGGATTAATTTTCCCTGACAGTTGTATATGA

Peptide Sequence

PEP ID

XP_016433576.1
PEP Infomation

PREDICTED: polygalacturonase-like [Nicotiana tabacum]
Sequence

MDNLIISCITVLLSSIFLFLQSNATSTYNVLSFGAKPNGQTDATQTFLKAWSAACSSVQP
ATIYVPRGRYLLKAATFRGPCQNRITVRIDGTLVAPLDYWAIGNSGYWLLFIQVNGISVI
GGNLDAKGAAFWACRKSGNNCPVGARSITFNWANDVVISGLLSINSQLTHIVINSCNNVM
VRKVRTIAPDQSPNTDGIHVQSSTGVTIIDSRFKTGDDCISIGPGTRNLWMENILCGPGH
GVSIGSLARNYEEDGVQNVTLVYSIFTGSDNGLRIKSWARSSTGFVTNINYRNIVMKYVD
NPIIIDQNYCPNKQDCPGETSGVKISQVTYENIQGTSTTPVAMKFDCSPSNPCKGIQIKD
IKLTHMNKKAQSFCKNVQGSKKGLIFPDSCI

Transcript Sequence

Gene sequence data has not been registered.